Breakpoint Completion
Often break points of common rearrangements are omitted by the user of the ISCN. For a range of such aberrations, a utility was developed which will add the respective break points.
The utility is accessed from the CyDAS Main
Window via the "Edit - Breakpoint
Search" menu:
Only the currently active group will be affected from the utility.
The following rearrangements are completed:
From Rearrangement | To Rearrangement |
t(11;19) | t(11;19)(q23;p13) |
t(15;17) | t(15;17)(q22;q21) |
t(4;11) | t(4;11)(q21;q23) |
t(7;11) | t(7;11)(p15;p15) |
t(8;21) | t(8;21)(q22;q22) |
t(9;11) | t(9;11)(p22;q23) |
t(9;22) | t(9;22)(q34;q11) |
The information which rearrangement can be completed and how this is done is stored in the database table "ExpandAberrations": There is no functionality inside the CyDAS application to change this table, but it may be edited with other programs accessing the database.